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AIDE

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First install and create a db

 aptitude install aide
 
 aideinit

First problem here, I got a memory leak. Removing some hash functions helped.

 #reduced checksums
  #Checksums     = md5+sha1+rmd160+haval+gost+crc32+tiger+whirlpool
  Checksums     = tiger+whirlpool

Second problem here

 aide --check

I receive a funny: Couldn't open file /tmp/empty/aide.db for reading

which I bypass with

 mkdir /tmp/empty 
 ln -s /var/lib/aide/aide.db /tmp/empty/aide.db

(problem is, tmp is going to be reset at startup, I think)

Still have to test if AIDE is effective detecting changes!

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