Close up atoms - by Yifan
This program measures distance of each atom to [x,y,z], and print out those pdb lines within the threshold.
Synopsis closeup pdbfile x y z threshold
Description pdbfile is your input pdb file x y z are coordinate of a point where distances are measured, you can copy x y z from the pdb line and paste it here Threshold is the distance limit of printing the atoms. Only those within this threshold are printed out. The serial number field of an ATOM line in the output will be replaced by the atom distance.